STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000034716Nephronophthisis 1. (537 aa)    
Predicted Functional Partners:
NPHP4
Nephrocystin 4.
   
 0.985
ENSNMLP00000042735
annotation not available
     
 0.980
ENSNMLP00000032104
annotation not available
   
 0.955
ENSNMLP00000020024
Myb-like, SWIRM and MPN domains 1.
    
 0.948
ENSNMLP00000018296
RPGRIP1 like.
    
 0.947
ENSNMLP00000010562
annotation not available
    
 0.930
ENSNMLP00000013779
Translocase of outer mitochondrial membrane 20.
    
 0.930
ENSNMLP00000016883
Dynactin 2 (p50).
    
 0.831
ENSNMLP00000035382
annotation not available
    
 
 0.827
ENSNMLP00000044691
Actin related protein 2/3 complex, subunit 3.
   
 0.827
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.