STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000035238Calcium channel, voltage-dependent, L type, alpha 1D subunit, a. (832 aa)    
Predicted Functional Partners:
ENSNMLP00000010236
annotation not available
   
 0.998
ENSNMLP00000014534
annotation not available
 
 
  0.960
ENSNMLP00000014528
annotation not available
 
 
  0.953
ENSNMLP00000004258
annotation not available
 
  
  0.921
ENSNMLP00000035231
annotation not available
 
     0.908
ENSNMLP00000012574
annotation not available
 
      0.872
ENSNMLP00000022993
Calcium channel, voltage-dependent, gamma subunit 1b.
   
 0.865
ENSNMLP00000030630
Calcium channel, voltage-dependent, gamma subunit 1a.
   
 0.865
ENSNMLP00000007600
Calcium voltage-gated channel auxiliary subunit alpha2delta 1.
   
 0.847
ENSNMLP00000012455
Calcium channel, voltage-dependent, alpha 2/delta subunit 2a.
   
 0.847
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.