STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP000000353142-oxoglutarate and iron-dependent oxygenase domain containing 1. (449 aa)    
Predicted Functional Partners:
ENSNMLP00000005578
Synaptonemal complex protein 3.
   
 
 0.910
ENSNMLP00000019533
annotation not available
   
 
 0.910
ENSNMLP00000036142
Tu translation elongation factor, mitochondrial.
   
   0.893
ENSNMLP00000005591
trans-L-3-hydroxyproline dehydratase.
    
  0.846
ENSNMLP00000022814
Crystallin, mu.
    
  0.837
ENSNMLP00000029297
Coproporphyrinogen oxidase.
   
  
 0.801
ENSNMLP00000000721
TSR1 ribosome maturation factor.
   
    0.748
ENSNMLP00000015525
Cytochrome c oxidase assembly factor 7.
   
 
  0.702
ENSNMLP00000016512
Pyrroline-5-carboxylate reductase 1a.
     
 0.702
ENSNMLP00000024925
annotation not available
     
 0.702
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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