STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB28RAB28, member RAS oncogene family. (222 aa)    
Predicted Functional Partners:
ENSNMLP00000005530
annotation not available
    
 0.734
ENSNMLP00000027297
RAB3A interacting protein (rabin3).
    
 0.733
ENSNMLP00000040332
RAB3A interacting protein (rabin3)-like 1.
    
 0.733
ENSNMLP00000023934
CCZ1 homolog, vacuolar protein trafficking and biogenesis associated.
    
 0.721
ENSNMLP00000037430
RAB interacting factor.
    
 
 0.686
ENSNMLP00000011084
annotation not available
    
 0.685
ENSNMLP00000018309
Exocyst complex component 6B.
    
 0.680
ENSNMLP00000039659
Rab interacting lysosomal protein-like 2.
    
 
 0.662
ENSNMLP00000001898
Dynein, cytoplasmic 1, light intermediate chain 2.
    
  0.661
ENSNMLP00000011288
Dynein, cytoplasmic 1, light intermediate chain 1.
    
  0.661
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.