STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000035436High mobility group 20A. (290 aa)    
Predicted Functional Partners:
ENSNMLP00000035831
Lysine (K)-specific demethylase 1a.
   
 0.941
ENSNMLP00000012500
High mobility group 20B.
  
 
 
0.906
ENSNMLP00000012226
PHD finger protein 21Ab.
    
 0.877
ENSNMLP00000044764
PHD finger protein 14.
   
 
 0.826
ENSNMLP00000023395
Actin related protein 8.
    
 0.823
ENSNMLP00000040055
General transcription factor IIH, polypeptide 1.
    
 0.789
ENSNMLP00000028832
General transcription factor IIH, polypeptide 3.
    
 0.785
ENSNMLP00000028258
REST corepressor 3.
   
 0.782
ENSNMLP00000033362
REST corepressor 2.
   
 0.782
RCOR3
REST corepressor 3.
   
 0.782
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.