STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000035455Chondroitin sulfate proteoglycan 4. (1328 aa)    
Predicted Functional Partners:
ENSNMLP00000017241
Nephronectin a.
     
 0.801
ENSNMLP00000031162
Glutamate receptor interacting protein 1.
    
 
 0.649
ENSNMLP00000013590
Agrin.
   
 
 0.631
ENSNMLP00000028480
Carbohydrate (chondroitin 4) sulfotransferase 11.
    
 0.617
ENSNMLP00000031746
Decorin.
     
 0.609
ENSNMLP00000034152
annotation not available
    
 
 0.579
ENSNMLP00000037636
Syndecan 4.
     
 0.564
ENSNMLP00000004247
Chondroitin sulfate N-acetylgalactosaminyltransferase 2.
     
 0.549
ENSNMLP00000002530
Carbohydrate (chondroitin 4) sulfotransferase 12a.
    
 0.548
ENSNMLP00000010675
Chondroitin sulfate synthase 1.
     
 0.535
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.