STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000035523Holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase). (915 aa)    
Predicted Functional Partners:
ENSNMLP00000034646
Pyruvate carboxylase b.
  
 
 0.978
ENSNMLP00000017330
Si:ch211-198n5.11.
  
 
 0.972
ENSNMLP00000043308
propionyl-CoA carboxylase subunit beta.
  
 
 0.910
ENSNMLP00000038616
Biotinidase.
    
 0.899
ENSNMLP00000020577
Nitrilase family, member 2.
    
 0.885
ENSNMLP00000015010
Adenylosuccinate lyase.
  
 
 0.855
ENSNMLP00000004533
Branched chain keto acid dehydrogenase E1 subunit alpha.
     
 0.835
ENSNMLP00000005621
Phosphopantothenoylcysteine decarboxylase.
  
 
 0.835
ENSNMLP00000009917
annotation not available
  
 
 0.835
ENSNMLP00000010832
Phosphopantothenoylcysteine synthetase.
  
 
 0.835
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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