STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000035568Serine active site containing 1. (658 aa)    
Predicted Functional Partners:
ENSNMLP00000033735
NOP56 ribonucleoprotein homolog.
   
 
  0.854
ENSNMLP00000032706
annotation not available
   
 
  0.851
ENSNMLP00000002063
TSEN54 tRNA splicing endonuclease subunit.
   
 
  0.826
ENSNMLP00000027594
annotation not available
   
 
  0.824
ENSNMLP00000034857
Fibrillarin.
   
 
  0.824
ENSNMLP00000042154
annotation not available
   
 
  0.800
ENSNMLP00000042157
POP4 homolog, ribonuclease P/MRP subunit.
   
 
  0.800
ENSNMLP00000019459
WSC domain containing 1b.
     
 0.783
ENSNMLP00000042205
WSC domain containing 2.
     
 0.783
ENSNMLP00000001659
Cortistatin.
     
 0.773
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.