STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000035626DEAD (Asp-Glu-Ala-Asp) box polypeptide 27. (684 aa)    
Predicted Functional Partners:
ENSNMLP00000002795
FtsJ RNA 2'-O-methyltransferase 3.
  
 0.999
ENSNMLP00000010480
Pescadillo.
   
 0.999
ENSNMLP00000032051
NOC2-like nucleolar associated transcriptional repressor.
   
 0.999
ENSNMLP00000007442
RNA binding motif protein 28.
   
 0.998
ENSNMLP00000013776
Nucleolar protein interacting with the FHA domain of MKI67.
   
 0.998
ENSNMLP00000017041
EBNA1 binding protein 2.
   
 0.997
ENSNMLP00000031591
WD repeat domain 12.
   
 0.997
ENSNMLP00000003489
Purinergic receptor P2Y11.
   
  0.995
ENSNMLP00000003636
Peter pan homolog.
   
  0.995
ENSNMLP00000028652
Danio rerio pumilio RNA-binding family member 3 (pum3), mRNA.
   
 0.995
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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