STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000035671General transcription factor IIIC, polypeptide 5. (473 aa)    
Predicted Functional Partners:
ENSNMLP00000022443
annotation not available
   
 0.999
ENSNMLP00000003559
annotation not available
   
 0.982
ENSNMLP00000035653
General transcription factor IIIC, polypeptide 4.
   
 0.980
ENSNMLP00000009522
annotation not available
   
 0.976
ENSNMLP00000034544
annotation not available
    
 0.947
ENSNMLP00000006711
BRF1 RNA polymerase III transcription initiation factor subunit a.
    
 0.922
ENSNMLP00000013875
BRF2 RNA polymerase III transcription initiation factor subunit.
    
 0.922
ENSNMLP00000003549
Zinc finger protein 512.
   
 0.912
ENSNMLP00000014969
Zinc finger protein 512B.
   
 0.912
ENSNMLP00000026114
Zinc finger protein 512.
   
 0.912
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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