STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000035709CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 3. (356 aa)    
Predicted Functional Partners:
ENSNMLP00000016276
General transcription factor IIF, polypeptide 1.
   
 0.893
ENSNMLP00000034226
Translocase of inner mitochondrial membrane 23 homolog a (yeast).
    
 0.857
ENSNMLP00000030491
Polymerase (RNA) II (DNA directed) polypeptide G-like.
    
 0.849
ENSNMLP00000032960
Translocase of inner mitochondrial membrane 21.
    
 0.801
ENSNMLP00000005080
Polymerase (RNA) II (DNA directed) polypeptide D.
    
 0.794
ENSNMLP00000013723
Polymerase (RNA) II (DNA directed) polypeptide J.
    
 0.783
ENSNMLP00000015078
RNA polymerase I and III subunit C.
    
 0.779
ENSNMLP00000033523
Polymerase (RNA) II (DNA directed) polypeptide C.
    
 0.779
ENSNMLP00000003945
Polymerase (RNA) II (DNA directed) polypeptide F.
   
 0.738
POLR2E
RNA polymerase II subunit E.
   
 0.733
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.