STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000035729Autophagy related 4D, cysteine peptidase b. (397 aa)    
Predicted Functional Partners:
ENSNMLP00000028777
GABA(A) receptor-associated protein b.
   
 0.989
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.989
ENSNMLP00000005340
Zgc:92606.
   
 0.961
ENSNMLP00000013339
Unc-51 like autophagy activating kinase 2.
   
 
 0.935
ENSNMLP00000044421
Unc-51 like autophagy activating kinase 1.
   
 
 0.935
MAP1LC3B
Microtubule associated protein 1 light chain 3 beta.
   
 0.930
ENSNMLP00000037648
Microtubule-associated protein 1 light chain 3 alpha.
   
 0.930
ENSNMLP00000019263
Microtubule-associated protein 1 light chain 3 gamma.
   
 0.912
ENSNMLP00000031054
Microtubule-associated protein 1 light chain 3 gamma, like.
   
 0.892
ENSNMLP00000029587
Autophagy related 3.
   
 
 0.843
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.