STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000035854Notch receptor 1b. (2330 aa)    
Predicted Functional Partners:
ENSNMLP00000001139
Mastermind-like transcriptional coactivator 1.
    
 0.995
ENSNMLP00000034936
Recombination signal binding protein for immunoglobulin kappa J region b.
    
 0.991
ENSNMLP00000035142
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 0.991
NCSTN
Nicastrin.
    
 0.986
ENSNMLP00000019426
Presenilin 1.
    
 0.974
ENSNMLP00000021442
Presenilin 2.
    
 0.974
ENSNMLP00000007474
Presenilin enhancer, gamma-secretase subunit.
    
 0.962
ENSNMLP00000020557
APH1B gamma secretase subunit.
    
 0.960
DLL4
Delta like canonical Notch ligand 4.
   
0.954
ENSNMLP00000043745
Delta-like 4 (Drosophila).
   
0.954
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.