STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000036234Ring finger protein 40. (1023 aa)    
Predicted Functional Partners:
ENSNMLP00000024830
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.993
ENSNMLP00000008235
annotation not available
    
 0.958
ENSNMLP00000012652
Ubiquitin-conjugating enzyme E2B (RAD6 homolog).
    
 0.958
ENSNMLP00000020867
annotation not available
    
 0.958
ENSNMLP00000033431
Ubiquitin-conjugating enzyme E2 variant 1.
     
 0.930
ENSNMLP00000030979
Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).
   
 0.926
ENSNMLP00000003020
PAF1 homolog, Paf1/RNA polymerase II complex component.
    
 0.920
ENSNMLP00000032687
Ubiquitin-conjugating enzyme E2Z.
   
 0.920
ENSNMLP00000006620
annotation not available
    
 0.907
ENSNMLP00000023837
annotation not available
    
 0.907
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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