STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000036336Sideroflexin 2. (322 aa)    
Predicted Functional Partners:
ENSNMLP00000004965
annotation not available
    
 0.613
RAB11A
RAB11A, member RAS oncogene family.
    
 0.613
ENSNMLP00000011695
RAB11B, member RAS oncogene family, b.
    
 0.613
ENSNMLP00000020752
annotation not available
    
 0.613
ENSNMLP00000020838
annotation not available
    
 0.613
ENSNMLP00000021609
RAB25, member RAS oncogene family a.
    
 0.603
ENSNMLP00000037763
RAB, member of RAS oncogene family-like 2.
    
 0.559
ENSNMLP00000009385
annotation not available
   
    0.454
ENSNMLP00000009387
annotation not available
   
    0.454
ENSNMLP00000009389
CBFA2/RUNX1 partner transcriptional co-repressor 2.
   
    0.454
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.