STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000036648Nuclear transcription factor, X-box binding 1. (1060 aa)    
Predicted Functional Partners:
ENSNMLP00000025912
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
   0.886
UBE3A
Ubiquitin protein ligase E3A.
     
 0.854
ENSNMLP00000032527
Ribosomal protein S12.
    
 
 0.822
ENSNMLP00000016925
Ribosomal protein L23a.
    
 
 0.780
ENSNMLP00000008284
Ribosomal protein S15.
    
   0.779
ENSNMLP00000021929
Ribosomal protein S2.
    
   0.779
ENSNMLP00000033124
Ribosomal protein S13.
    
   0.779
ENSNMLP00000024986
annotation not available
    
 
 0.755
ENSNMLP00000018021
RAD50 interactor 1.
   
    0.747
ENSNMLP00000018906
Ubiquitin protein ligase E3A.
     
 0.741
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.