STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHFPL6LHFPL tetraspan subfamily member 6. (200 aa)    
Predicted Functional Partners:
ENSNMLP00000006603
Dachsous cadherin-related 1a.
   
 0.578
ENSNMLP00000033318
annotation not available
   
 0.546
ENSNMLP00000037142
Component of oligomeric golgi complex 6.
      
 0.542
ENSNMLP00000023065
5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled-like 1.
      
 0.509
ENSNMLP00000005239
Mitochondrial ribosomal protein S31.
      
 0.503
ENSNMLP00000006037
annotation not available
   
 0.478
ENSNMLP00000018113
annotation not available
   
 0.478
ENSNMLP00000032788
Zgc:92907.
      
 0.468
ENSNMLP00000015498
Si:dkey-22o22.2.
    
 0.450
CDH8
Cadherin 8.
   
 0.443
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.