STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000037099H6 family homeobox 3b. (299 aa)    
Predicted Functional Partners:
ENSNMLP00000007394
ISY1 splicing factor homolog.
    
   0.706
ENSNMLP00000041451
Protein phosphatase 1, regulatory subunit 21.
    
   0.706
ENSNMLP00000011902
Histone H4 transcription factor.
    
   0.696
ENSNMLP00000013143
Zgc:112083.
    
   0.696
ENSNMLP00000000419
Dystrobrevin, beta a.
   
   0.672
ENSNMLP00000004423
Dystrobrevin, alpha.
   
   0.672
ENSNMLP00000038311
Dystrobrevin, beta b.
   
   0.672
ENSNMLP00000018401
annotation not available
    
 
 0.565
ENSNMLP00000023324
T-box transcription factor 1.
    
 
 0.565
ENSNMLP00000006668
T-box transcription factor 18.
    
 
 0.491
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.