ENSNMLP00000037197 protein (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSNMLP00000037197

G protein-coupled receptor 84. (372 aa)

Predicted Functional Partners:

ENSNMLP00000007467

0.661

ENSNMLP00000022738

0.593

ENSNMLP00000003764

0.585

ENSNMLP00000015221

0.583

ENSNMLP00000028579

0.572

ENSNMLP00000010166

0.551

ENSNMLP00000000760

0.550

ENSNMLP00000001209

0.550

ENSNMLP00000011718

0.550

ENSNMLP00000013318

0.550

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSNMLP00000000760	ENSNMLP00000001209	Guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1.	Guanine nucleotide binding protein (G protein), gamma 10.	0.920
ENSNMLP00000000760	ENSNMLP00000007467	Guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1.	annotation not available	0.881
ENSNMLP00000000760	ENSNMLP00000010166	Guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1.	annotation not available	0.903
ENSNMLP00000000760	ENSNMLP00000011718	Guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1.	Guanine nucleotide binding protein (G protein), gamma 8.	0.854
ENSNMLP00000000760	ENSNMLP00000013318	Guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1.	Guanine nucleotide binding protein (G protein), gamma 13b.	0.886
ENSNMLP00000000760	ENSNMLP00000015221	Guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1.	Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4.	0.921
ENSNMLP00000000760	ENSNMLP00000037197	Guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1.	G protein-coupled receptor 84.	0.550
ENSNMLP00000001209	ENSNMLP00000000760	Guanine nucleotide binding protein (G protein), gamma 10.	Guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1.	0.920
ENSNMLP00000001209	ENSNMLP00000007467	Guanine nucleotide binding protein (G protein), gamma 10.	annotation not available	0.881
ENSNMLP00000001209	ENSNMLP00000010166	Guanine nucleotide binding protein (G protein), gamma 10.	annotation not available	0.862
ENSNMLP00000001209	ENSNMLP00000013318	Guanine nucleotide binding protein (G protein), gamma 10.	Guanine nucleotide binding protein (G protein), gamma 13b.	0.898
ENSNMLP00000001209	ENSNMLP00000015221	Guanine nucleotide binding protein (G protein), gamma 10.	Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4.	0.910
ENSNMLP00000001209	ENSNMLP00000037197	Guanine nucleotide binding protein (G protein), gamma 10.	G protein-coupled receptor 84.	0.550
ENSNMLP00000003764	ENSNMLP00000037197	Peptide YYa.	G protein-coupled receptor 84.	0.585
ENSNMLP00000007467	ENSNMLP00000000760	annotation not available	Guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1.	0.881
ENSNMLP00000007467	ENSNMLP00000001209	annotation not available	Guanine nucleotide binding protein (G protein), gamma 10.	0.881
ENSNMLP00000007467	ENSNMLP00000010166	annotation not available	annotation not available	0.881
ENSNMLP00000007467	ENSNMLP00000011718	annotation not available	Guanine nucleotide binding protein (G protein), gamma 8.	0.881
ENSNMLP00000007467	ENSNMLP00000013318	annotation not available	Guanine nucleotide binding protein (G protein), gamma 13b.	0.881
ENSNMLP00000007467	ENSNMLP00000015221	annotation not available	Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4.	0.761