STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000037273SHOC2 leucine rich repeat scaffold protein. (582 aa)    
Predicted Functional Partners:
ENSNMLP00000044249
Muscle RAS oncogene homolog.
    
 0.992
ENSNMLP00000036600
Protein phosphatase 1, catalytic subunit, alpha isozyme b.
    
 0.954
ENSNMLP00000038247
Protein phosphatase 1, catalytic subunit, alpha isozyme a.
    
 0.954
ENSNMLP00000043400
annotation not available
    
 0.954
ENSNMLP00000011595
RAS related 2.
    
 0.943
HRAS
HRas proto-oncogene, GTPase.
   
 0.874
KRAS
KRAS proto-oncogene, GTPase.
   
 0.872
ENSNMLP00000035951
Zgc:55558.
   
 0.872
ENSNMLP00000028707
B-Raf proto-oncogene, serine/threonine kinase.
    
 0.870
ENSNMLP00000039849
Raf-1 proto-oncogene, serine/threonine kinase a.
 
  
 0.870
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.