STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000037503Vertebrae development associated. (636 aa)    
Predicted Functional Partners:
ENSNMLP00000001655
Transmembrane protein 192.
    
 0.552
ENSNMLP00000005177
ATP-binding cassette, sub-family D (ALD), member 4.
      
 0.517
ENSNMLP00000009798
Syntabulin (syntaxin-interacting).
     
 0.507
AREL1
Apoptosis resistant E3 ubiquitin protein ligase 1.
      
 0.485
ENSNMLP00000026929
C9orf72-SMCR8 complex subunit.
    
   0.444
ENSNMLP00000002648
annotation not available
    
  0.418
ENSNMLP00000022695
Potassium channel tetramerization domain containing 2.
    
  0.418
ENSNMLP00000035600
Ubiquitin-conjugating enzyme E2Ia.
    
  0.418
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.