STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000037512annotation not available (607 aa)    
Predicted Functional Partners:
ENSNMLP00000022926
Caspase 6, apoptosis-related cysteine peptidase a.
    
 0.877
ENSNMLP00000020427
Lamin B1.
   
 
0.867
ENSNMLP00000037914
Barrier to autointegration factor 1.
   
 0.863
ENSNMLP00000004506
annotation not available
  
  
0.848
LMNA
Lamin A/C.
     
0.845
ENSNMLP00000043781
Granzyme 3, tandem duplicate 3.
    
 0.844
ENSNMLP00000023697
annotation not available
    
 0.843
ENSNMLP00000007694
annotation not available
    
 0.824
ENSNMLP00000017874
LEM domain containing 3.
    
 0.821
ENSNMLP00000014538
annotation not available
    
 0.713
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.