STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000037575Sodium channel, voltage gated, type VIII, alpha subunit b. (2000 aa)    
Predicted Functional Partners:
ENSNMLP00000010236
annotation not available
   
 0.998
ENSNMLP00000009348
Sodium channel, voltage-gated, type II, beta.
   
 0.954
ENSNMLP00000014808
Sodium channel, voltage-gated, type I, beta a.
   
 0.944
ENSNMLP00000040083
Sodium channel, voltage-gated, type I, beta b.
   
 0.938
ENSNMLP00000015356
Sodium channel, voltage-gated, type III, beta.
    
 0.895
ENSNMLP00000009813
Sodium channel, voltage-gated, type IV, alpha, a.
  
 
0.859
ENSNMLP00000009347
Sodium channel, voltage-gated, type IV, beta a.
    
 0.831
ENSNMLP00000020312
Sodium channel, voltage-gated, type I like, alpha b.
  
 
 
0.785
ENSNMLP00000007200
annotation not available
  
  
 
0.784
ENSNMLP00000001083
annotation not available
    
 0.782
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.