STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000037661SRY-box transcription factor 19b. (258 aa)    
Predicted Functional Partners:
ENSNMLP00000010494
POU domain, class 5, transcription factor 3.
    
 0.856
ENSNMLP00000041888
Catenin (cadherin-associated protein), beta 1.
    
 0.682
ENSNMLP00000002648
annotation not available
    
   0.646
ENSNMLP00000035600
Ubiquitin-conjugating enzyme E2Ia.
    
   0.646
ENSNMLP00000019516
Spalt-like transcription factor 4.
   
 0.580
ENSNMLP00000009462
POU class 3 homeobox 3b.
   
 0.520
ENSNMLP00000022914
Lymphoid enhancer-binding factor 1.
    
 0.513
ENSNMLP00000000199
Brain-specific homeobox.
    
 0.511
ENSNMLP00000001663
annotation not available
    
 0.509
ENSNMLP00000001972
POU class 2 homeobox 3.
    
 0.509
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.