STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000037802Nuclear protein 1b. (74 aa)    
Predicted Functional Partners:
ENSNMLP00000010221
NSA2 ribosome biogenesis homolog (S. cerevisiae).
    
 
 0.573
ENSNMLP00000022087
Rabaptin, RAB GTPase binding effector protein 2.
      
 0.537
ENSNMLP00000037813
SAGA complex associated factor 29.
      
 0.523
ENSNMLP00000036142
Tu translation elongation factor, mitochondrial.
      
 0.516
ENSNMLP00000004898
SH3 domain containing ring finger 3.
      
 0.493
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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