STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000038293Zinc finger CCCH-type containing 18. (933 aa)    
Predicted Functional Partners:
ENSNMLP00000010236
annotation not available
    
 0.880
ENSNMLP00000012382
annotation not available
    
  0.871
ENSNMLP00000024830
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.833
ENSNMLP00000037698
Nuclear cap binding protein subunit 2.
   
 0.796
ENSNMLP00000025913
Splicing factor 3a, subunit 2.
   
   0.691
RIMS2
Regulating synaptic membrane exocytosis 2.
  
 
  0.677
ENSNMLP00000021589
Structure specific recognition protein 1a.
   
 0.655
ENSNMLP00000029133
SLAIN motif family, member 2.
    
 0.651
ENSNMLP00000005251
annotation not available
   
 
 0.647
ENSNMLP00000019439
annotation not available
   
 0.624
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.