STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000038320Whirlin a. (489 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.936
ENSNMLP00000036118
Membrane protein, palmitoylated 1.
    
 0.901
ENSNMLP00000026187
annotation not available
    
 
 0.876
ENSNMLP00000040825
PDZ domain containing 7a.
     
0.866
ENSNMLP00000021721
annotation not available
    
 0.839
ENSNMLP00000035170
Vezatin, adherens junctions transmembrane protein.
     
 0.820
ENSNMLP00000014381
annotation not available
    
 0.795
ENSNMLP00000018408
annotation not available
    
 0.795
ENSNMLP00000019888
annotation not available
    
 0.795
ENSNMLP00000023143
Pleckstrin homology, MyTH4 and FERM domain containing H3.
    
 0.795
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.