STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITRM1Pitrilysin metallopeptidase 1. (1025 aa)    
Predicted Functional Partners:
ENSNMLP00000028846
Amyloid beta (A4) precursor protein b.
    
 
 0.897
ENSNMLP00000044468
annotation not available
    
 
 0.897
ENSNMLP00000003345
Amyloid beta (A4) precursor-like protein 2.
    
 
 0.741
ENSNMLP00000015646
Activating transcription factor 6.
   
    0.738
ENSNMLP00000026304
annotation not available
   
    0.738
ENSNMLP00000003235
Dihydrolipoamide dehydrogenase.
   
 
 0.724
ENSNMLP00000011791
annotation not available
   
   0.697
ENSNMLP00000012136
Pyruvate dehydrogenase E1 alpha 1 subunit a.
   
   0.697
ENSNMLP00000015296
annotation not available
   
   0.697
ENSNMLP00000018767
O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1.
   
    0.697
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.