STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000038500annotation not available (110 aa)    
Predicted Functional Partners:
ENSNMLP00000012909
Decapping mRNA 2.
    
 0.985
ENSNMLP00000034758
Enhancer of mRNA decapping 3 homolog (S. cerevisiae).
   
 0.980
ENSNMLP00000000859
DEAD (Asp-Glu-Ala-Asp) box helicase 6.
   
 0.975
ENSNMLP00000023568
PAT1 homolog 1, processing body mRNA decay factor.
    
 0.958
ENSNMLP00000003840
annotation not available
  
 
0.953
ENSNMLP00000014941
YjeF N-terminal domain containing 3.
   
 0.910
ENSNMLP00000040081
NAD(P)HX epimerase.
   
 0.910
ENSNMLP00000016848
UPF1 RNA helicase and ATPase.
    
 0.906
ENSNMLP00000038501
Decapping mRNA 1B.
 
      0.899
ENSNMLP00000039148
Proline-rich nuclear receptor coactivator 2.
    
 0.887
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.