STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000038862Lin-7 homolog B (C. elegans). (214 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.998
ENSNMLP00000008348
Molybdenum cofactor synthesis 3.
    
 0.969
ENSNMLP00000036118
Membrane protein, palmitoylated 1.
    
 0.920
ENSNMLP00000037909
Peroxiredoxin 5.
   
 0.907
ENSNMLP00000037911
Peroxiredoxin 5.
   
 0.907
ENSNMLP00000003448
Membrane protein, palmitoylated 2b (MAGUK p55 subfamily member 2).
    
 0.864
ENSNMLP00000003808
Membrane protein, palmitoylated 2a (MAGUK p55 subfamily member 2).
    
 0.864
ENSNMLP00000013046
Membrane protein, palmitoylated 6a (MAGUK p55 subfamily member 6).
    
 0.864
ENSNMLP00000021092
annotation not available
    
 0.864
ENSNMLP00000003604
annotation not available
    
 0.848
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.