ENSNMLP00000038906 protein (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSNMLP00000038906

Maternal embryonic leucine zipper kinase. (656 aa)

Predicted Functional Partners:

ENSNMLP00000044318

0.983

ENSNMLP00000023083

0.974

ENSNMLP00000038445

0.973

ENSNMLP00000012542

0.966

ENSNMLP00000022127

0.961

ENSNMLP00000024660

0.948

ENSNMLP00000025523

0.948

ENSNMLP00000011552

0.936

ENSNMLP00000007177

0.930

ENSNMLP00000041596

0.927

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSNMLP00000007177	ENSNMLP00000011552	Ubiquitin-conjugating enzyme E2C.	MAD2 mitotic arrest deficient-like 1 (yeast).	0.953
ENSNMLP00000007177	ENSNMLP00000012542	Ubiquitin-conjugating enzyme E2C.	NDC80 kinetochore complex component.	0.907
ENSNMLP00000007177	ENSNMLP00000022127	Ubiquitin-conjugating enzyme E2C.	Baculoviral IAP repeat containing 5a.	0.993
ENSNMLP00000007177	ENSNMLP00000023083	Ubiquitin-conjugating enzyme E2C.	annotation not available	0.961
ENSNMLP00000007177	ENSNMLP00000024660	Ubiquitin-conjugating enzyme E2C.	TPX2 microtubule nucleation factor.	0.952
ENSNMLP00000007177	ENSNMLP00000025523	Ubiquitin-conjugating enzyme E2C.	UF2 component of NDC80 kinetochore complex.	0.901
ENSNMLP00000007177	ENSNMLP00000038445	Ubiquitin-conjugating enzyme E2C.	PDZ binding kinase.	0.967
ENSNMLP00000007177	ENSNMLP00000038906	Ubiquitin-conjugating enzyme E2C.	Maternal embryonic leucine zipper kinase.	0.930
ENSNMLP00000007177	ENSNMLP00000041596	Ubiquitin-conjugating enzyme E2C.	Nucleolar and spindle associated protein 1.	0.965
ENSNMLP00000007177	ENSNMLP00000044318	Ubiquitin-conjugating enzyme E2C.	BUB1 mitotic checkpoint serine/threonine kinase.	0.989
ENSNMLP00000011552	ENSNMLP00000007177	MAD2 mitotic arrest deficient-like 1 (yeast).	Ubiquitin-conjugating enzyme E2C.	0.953
ENSNMLP00000011552	ENSNMLP00000012542	MAD2 mitotic arrest deficient-like 1 (yeast).	NDC80 kinetochore complex component.	0.989
ENSNMLP00000011552	ENSNMLP00000022127	MAD2 mitotic arrest deficient-like 1 (yeast).	Baculoviral IAP repeat containing 5a.	0.984
ENSNMLP00000011552	ENSNMLP00000023083	MAD2 mitotic arrest deficient-like 1 (yeast).	annotation not available	0.901
ENSNMLP00000011552	ENSNMLP00000024660	MAD2 mitotic arrest deficient-like 1 (yeast).	TPX2 microtubule nucleation factor.	0.691
ENSNMLP00000011552	ENSNMLP00000025523	MAD2 mitotic arrest deficient-like 1 (yeast).	UF2 component of NDC80 kinetochore complex.	0.993
ENSNMLP00000011552	ENSNMLP00000038445	MAD2 mitotic arrest deficient-like 1 (yeast).	PDZ binding kinase.	0.969
ENSNMLP00000011552	ENSNMLP00000038906	MAD2 mitotic arrest deficient-like 1 (yeast).	Maternal embryonic leucine zipper kinase.	0.936
ENSNMLP00000011552	ENSNMLP00000041596	MAD2 mitotic arrest deficient-like 1 (yeast).	Nucleolar and spindle associated protein 1.	0.828
ENSNMLP00000011552	ENSNMLP00000044318	MAD2 mitotic arrest deficient-like 1 (yeast).	BUB1 mitotic checkpoint serine/threonine kinase.	0.999