STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000038995Sp5 transcription factor a. (339 aa)    
Predicted Functional Partners:
ENSNMLP00000012382
annotation not available
    
  0.841
ENSNMLP00000007467
annotation not available
    
  0.593
ENSNMLP00000012380
annotation not available
    
  0.531
ENSNMLP00000011244
annotation not available
    
  0.526
ENSNMLP00000038870
Upstream transcription factor 2, c-fos interacting.
    
  0.526
ENSNMLP00000029633
Nuclear receptor coactivator 3.
    
  0.519
ENSNMLP00000036683
Nuclear receptor coactivator 1.
    
  0.519
ENSNMLP00000016805
BRCA1 associated RING domain 1.
    
  0.518
SPOP
Speckle type BTB/POZ protein.
   
  0.499
ENSNMLP00000043865
Speckle type BTB/POZ protein like b.
   
  0.499
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.