STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000039156Rhomboid, veinlet-like 2 (Drosophila). (238 aa)    
Predicted Functional Partners:
ENSNMLP00000006553
Methenyltetrahydrofolate synthetase domain containing.
  
    0.525
ENSNMLP00000015524
5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase).
  
    0.525
NCSTN
Nicastrin.
      
 0.511
ENSNMLP00000028455
Presenilin associated, rhomboid-like a.
      
 0.509
ENSNMLP00000007474
Presenilin enhancer, gamma-secretase subunit.
      
 0.495
ENSNMLP00000034748
Prohibitin 2b.
  
 0.469
ENSNMLP00000014373
Galactokinase 1.
    
  0.456
ENSNMLP00000030215
Galactokinase 2.
    
  0.456
ENSNMLP00000005431
Ubiquitin associated and SH3 domain containing Ba.
    
  0.450
ENSNMLP00000013964
Ubiquitin associated and SH3 domain containing Bb.
    
  0.450
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.