STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000039399Opsin 1 (cone pigments), short-wave-sensitive 2. (351 aa)    
Predicted Functional Partners:
ENSNMLP00000022669
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
 0.843
ENSNMLP00000000760
Guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1.
   
 0.813
ENSNMLP00000019720
Clusterin-like 1 (retinal).
   
    0.813
ENSNMLP00000014206
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
   
 0.810
ENSNMLP00000010166
annotation not available
   
 0.776
ENSNMLP00000037915
Guanine nucleotide binding protein (G protein), gamma 3.
    
 0.730
ENSNMLP00000001209
Guanine nucleotide binding protein (G protein), gamma 10.
    
  0.717
ENSNMLP00000011718
Guanine nucleotide binding protein (G protein), gamma 8.
    
  0.717
ENSNMLP00000013318
Guanine nucleotide binding protein (G protein), gamma 13b.
    
  0.717
ENSNMLP00000020184
annotation not available
   
 
0.694
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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