STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000039699CCHC-type zinc finger, nucleic acid binding protein a. (166 aa)    
Predicted Functional Partners:
ENSNMLP00000017533
Heterogeneous nuclear ribonucleoprotein K.
   
  
 0.902
ENSNMLP00000001283
Mtr4 exosome RNA helicase.
   
 0.849
ENSNMLP00000041043
Mitochondrial rRNA methyltransferase 2.
   
 
 0.632
ENSNMLP00000032458
Ribosomal protein S3.
   
 
 0.623
ENSNMLP00000001397
Terminal nucleotidyltransferase 4A.
   
 0.621
ENSNMLP00000007124
Terminal nucleotidyltransferase 4B.
   
 0.621
ENSNMLP00000040378
annotation not available
   
 0.621
ENSNMLP00000022352
SERPINE1 mRNA binding protein 1a.
   
 
 0.604
ENSNMLP00000030934
SERPINE1 mRNA binding protein 1b.
   
 
 0.604
ENSNMLP00000013825
Ribosomal protein L4.
   
   0.594
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.