STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000039945Itchy E3 ubiquitin protein ligase b. (881 aa)    
Predicted Functional Partners:
ENSNMLP00000001079
Ribosomal protein S27a.
    
 0.956
ENSNMLP00000026790
annotation not available
    
 0.948
ENSNMLP00000019009
TNF receptor-associated factor 6.
    
 0.945
ENSNMLP00000001704
Ubiquitin B.
    
 0.941
ENSNMLP00000015332
WW domain containing E3 ubiquitin protein ligase 1.
  
 
0.929
ENSNMLP00000007557
annotation not available
    
 0.923
ENSNMLP00000033477
WW domain containing E3 ubiquitin protein ligase 2.
  
 
0.899
ENSNMLP00000024772
MDM2 proto-oncogene.
    
 0.878
ENSNMLP00000000012
Cbl proto-oncogene B, E3 ubiquitin protein ligase.
    
 0.863
ENSNMLP00000016684
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.862
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.