ENSNMLP00000040241 protein (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSNMLP00000040241

annotation not available (343 aa)

Predicted Functional Partners:

ENSNMLP00000031060

0.795

ENSNMLP00000016342

0.769

ENSNMLP00000022948

0.769

ENSNMLP00000011794

0.755

ENSNMLP00000003529

0.702

ENSNMLP00000003544

0.702

ENSNMLP00000004906

0.702

ENSNMLP00000004949

0.702

ENSNMLP00000005279

0.702

ENSNMLP00000011165

0.702

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSNMLP00000003529	ENSNMLP00000011794	annotation not available	annotation not available	0.766
ENSNMLP00000003529	ENSNMLP00000040241	annotation not available	annotation not available	0.702
ENSNMLP00000003544	ENSNMLP00000011794	annotation not available	annotation not available	0.766
ENSNMLP00000003544	ENSNMLP00000040241	annotation not available	annotation not available	0.702
ENSNMLP00000004906	ENSNMLP00000011794	annotation not available	annotation not available	0.757
ENSNMLP00000004906	ENSNMLP00000040241	annotation not available	annotation not available	0.702
ENSNMLP00000004949	ENSNMLP00000011794	annotation not available	annotation not available	0.766
ENSNMLP00000004949	ENSNMLP00000040241	annotation not available	annotation not available	0.702
ENSNMLP00000005279	ENSNMLP00000011794	annotation not available	annotation not available	0.766
ENSNMLP00000005279	ENSNMLP00000040241	annotation not available	annotation not available	0.702
ENSNMLP00000011165	ENSNMLP00000011794	annotation not available	annotation not available	0.766
ENSNMLP00000011165	ENSNMLP00000040241	annotation not available	annotation not available	0.702
ENSNMLP00000011794	ENSNMLP00000003529	annotation not available	annotation not available	0.766
ENSNMLP00000011794	ENSNMLP00000003544	annotation not available	annotation not available	0.766
ENSNMLP00000011794	ENSNMLP00000004906	annotation not available	annotation not available	0.757
ENSNMLP00000011794	ENSNMLP00000004949	annotation not available	annotation not available	0.766
ENSNMLP00000011794	ENSNMLP00000005279	annotation not available	annotation not available	0.766
ENSNMLP00000011794	ENSNMLP00000011165	annotation not available	annotation not available	0.766
ENSNMLP00000011794	ENSNMLP00000040241	annotation not available	annotation not available	0.755
ENSNMLP00000016342	ENSNMLP00000022948	Chaperonin containing TCP1, subunit 8 (theta).	Chaperonin containing TCP1, subunit 6A (zeta 1).	0.999