STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000040270Vascular endothelial growth factor D. (259 aa)    
Predicted Functional Partners:
ENSNMLP00000032769
annotation not available
    
 0.866
ENSNMLP00000025737
Platelet derived growth factor c.
     
 0.863
ENSNMLP00000032705
Vascular endothelial growth factor c.
     
0.855
ENSNMLP00000022324
Platelet-derived growth factor alpha polypeptide b.
     
 0.854
ENSNMLP00000027365
Platelet derived growth factor d.
     
 0.854
ENSNMLP00000013354
annotation not available
    
  0.851
ENSNMLP00000025752
Nerve growth factor receptor a (TNFR superfamily, member 16).
     
 0.849
ENSNMLP00000018317
MET proto-oncogene, receptor tyrosine kinase.
    
 0.839
ENSNMLP00000033544
Macrophage stimulating 1 receptor a.
    
 0.839
ENSNMLP00000039562
annotation not available
    
 0.839
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.