STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000040387Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a. (647 aa)    
Predicted Functional Partners:
PTK7
Protein tyrosine kinase 7 (inactive).
    
 0.928
ENSNMLP00000007467
annotation not available
    
 0.889
LRIT2
Leucine rich repeat, Ig-like and transmembrane domains 2.
  
0.871
ENSNMLP00000040386
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 2.
  
0.871
ENSNMLP00000024480
Receptor-interacting serine-threonine kinase 4.
    
 0.865
ENSNMLP00000004184
annotation not available
    
 0.858
ENSNMLP00000013742
Netrin g1a.
    
 0.850
ENSNMLP00000036895
Vav 3 guanine nucleotide exchange factor b.
    
 0.850
ENSNMLP00000003904
annotation not available
    
 0.835
HABP2
Hyaluronan binding protein 2.
    
 0.835
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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