STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000040685RUN domain containing 3b. (367 aa)    
Predicted Functional Partners:
ENSNMLP00000024557
UV radiation resistance associated gene.
    
 0.848
ENSNMLP00000001816
Adaptor related protein complex 2 subunit sigma 1.
    
   0.649
ENSNMLP00000042735
annotation not available
    
   0.601
ENSNMLP00000040672
Solute carrier family 25 member 40.
      
 0.570
ENSNMLP00000032262
Phosphatidylinositol 3-kinase, catalytic subunit type 3.
    
 
 0.538
ENSNMLP00000028400
Cyclin D binding myb-like transcription factor 1.
      
 0.521
ENSNMLP00000006462
Beclin 1, autophagy related.
    
 
 0.519
ENSNMLP00000026491
Vacuolar protein sorting 45 homolog.
     
 0.481
ENSNMLP00000039522
Solute carrier family 25 member 39.
      
 0.471
TMEM19
Transmembrane protein 19.
      
 0.468
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.