STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPDEF-2SAM pointed domain containing ETS transcription factor. (257 aa)    
Predicted Functional Partners:
ENSNMLP00000002342
Chromosome 5 open reading frame 30.
    
   0.694
ENSNMLP00000006276
RUNX family transcription factor 2b.
    
 0.511
ENSNMLP00000027439
RUNX family transcription factor 3.
    
 0.511
ENSNMLP00000039167
annotation not available
    
 0.511
ENSNMLP00000044768
RUNX family transcription factor 1.
    
 0.511
ENSNMLP00000042332
Anterior gradient 2.
   
  
 0.510
ENSNMLP00000024417
Serum response factor b.
     
 0.493
ENSNMLP00000024418
annotation not available
     
 0.493
ENSNMLP00000040504
annotation not available
    
 
 0.492
ENSNMLP00000042126
CCAAT enhancer binding protein gamma.
    
 0.486
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.