STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000040857High mobility group AT-hook 1a. (99 aa)    
Predicted Functional Partners:
ENSNMLP00000012957
annotation not available
  
 
0.708
ENSNMLP00000016229
Jun proto-oncogene, AP-1 transcription factor subunit.
    
 
 0.674
ENSNMLP00000029833
Histone cell cycle regulator a.
    
  0.606
ENSNMLP00000019029
annotation not available
   
  
 0.529
ENSNMLP00000021369
3-hydroxy-3-methylglutaryl-CoA reductase a.
      
 0.509
ENSNMLP00000013744
Protein arginine methyltransferase 6.
    
 
 0.470
ENSNMLP00000037914
Barrier to autointegration factor 1.
    
 
 0.442
ENSNMLP00000011192
Small nuclear ribonucleoprotein polypeptide C.
   
  
 0.429
ENSNMLP00000021935
Tumor protein p53.
    
 0.417
ENSNMLP00000027262
Tumor protein p63.
    
 0.417
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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