STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000040982Zinc finger protein, FOG family member 1. (755 aa)    
Predicted Functional Partners:
ENSNMLP00000039390
GATA binding protein 1a.
   
 0.958
ENSNMLP00000037281
Retinoblastoma binding protein 4.
    
 0.862
RBBP7
RB binding protein 7, chromatin remodeling factor.
    
 0.862
ENSNMLP00000012382
annotation not available
    
  0.841
ENSNMLP00000007219
GATA binding protein 4.
   
 0.826
ENSNMLP00000036596
GATA binding protein 5.
   
 0.826
GATA2
GATA binding protein 2.
    
 0.766
ENSNMLP00000030514
GATA binding protein 3.
    
 0.766
ENSNMLP00000035392
GATA binding protein 2a.
    
 0.766
ENSNMLP00000044203
GATA binding protein 6.
    
 0.729
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.