Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
ENSNMLP00000010455 | ENSNMLP00000012220 | LIM homeobox 9. | LIM domain only 1. | 0.682 |
ENSNMLP00000010455 | ENSNMLP00000012279 | LIM homeobox 9. | Transcription factor 3b. | 0.474 |
ENSNMLP00000010455 | ENSNMLP00000034605 | LIM homeobox 9. | Transcription factor 12. | 0.445 |
ENSNMLP00000010455 | ENSNMLP00000041025 | LIM homeobox 9. | LIM domain binding 2a. | 0.864 |
ENSNMLP00000010455 | ENSNMLP00000044164 | LIM homeobox 9. | LIM domain only 3. | 0.682 |
ENSNMLP00000012220 | ENSNMLP00000010455 | LIM domain only 1. | LIM homeobox 9. | 0.682 |
ENSNMLP00000012220 | ENSNMLP00000012279 | LIM domain only 1. | Transcription factor 3b. | 0.712 |
ENSNMLP00000012220 | ENSNMLP00000018660 | LIM domain only 1. | annotation not available | 0.791 |
ENSNMLP00000012220 | ENSNMLP00000019007 | LIM domain only 1. | LIM homeobox 2b. | 0.682 |
ENSNMLP00000012220 | ENSNMLP00000028469 | LIM domain only 1. | T-cell acute lymphocytic leukemia 1. | 0.818 |
ENSNMLP00000012220 | ENSNMLP00000034605 | LIM domain only 1. | Transcription factor 12. | 0.712 |
ENSNMLP00000012220 | ENSNMLP00000041025 | LIM domain only 1. | LIM domain binding 2a. | 0.938 |
ENSNMLP00000012279 | ENSNMLP00000010455 | Transcription factor 3b. | LIM homeobox 9. | 0.474 |
ENSNMLP00000012279 | ENSNMLP00000012220 | Transcription factor 3b. | LIM domain only 1. | 0.712 |
ENSNMLP00000012279 | ENSNMLP00000018660 | Transcription factor 3b. | annotation not available | 0.897 |
ENSNMLP00000012279 | ENSNMLP00000019007 | Transcription factor 3b. | LIM homeobox 2b. | 0.462 |
ENSNMLP00000012279 | ENSNMLP00000022914 | Transcription factor 3b. | Lymphoid enhancer-binding factor 1. | 0.828 |
ENSNMLP00000012279 | ENSNMLP00000028469 | Transcription factor 3b. | T-cell acute lymphocytic leukemia 1. | 0.925 |
ENSNMLP00000012279 | ENSNMLP00000035959 | Transcription factor 3b. | LIM domain only 2 (rhombotin-like 1). | 0.890 |
ENSNMLP00000012279 | ENSNMLP00000041025 | Transcription factor 3b. | LIM domain binding 2a. | 0.842 |
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