STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000041037PRP40 pre-mRNA processing factor 40 homolog A. (703 aa)    
Predicted Functional Partners:
ENSNMLP00000000406
RNA binding motif protein 25a.
   
 0.952
ENSNMLP00000015287
annotation not available
   
 0.952
ENSNMLP00000025913
Splicing factor 3a, subunit 2.
   
 0.929
ENSNMLP00000020260
Splicing factor 3b, subunit 1.
   
 0.928
ENSNMLP00000011192
Small nuclear ribonucleoprotein polypeptide C.
   
 0.919
ENSNMLP00000005930
U2 small nuclear RNA auxiliary factor 2a.
   
 0.917
ENSNMLP00000015215
Small nuclear ribonucleoprotein polypeptide B2.
   
 0.905
ENSNMLP00000000379
LUC7-like (S. cerevisiae).
    
 0.895
ENSNMLP00000003093
Zgc:158803.
    
 0.895
ENSNMLP00000026891
Small nuclear ribonucleoprotein 35 (U11/U12).
   
 0.894
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.