STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000041077G patch domain containing 8. (1468 aa)    
Predicted Functional Partners:
ENSNMLP00000018525
UTP6 small subunit processome component.
    
 0.850
ENSNMLP00000019648
DEAQ box RNA-dependent ATPase 1.
    
 0.844
ENSNMLP00000010855
IMP U3 small nucleolar ribonucleoprotein 3.
    
  0.843
ENSNMLP00000012230
Ribosomal RNA processing 36.
   
  0.843
ENSNMLP00000017762
Bystin-like.
    
 0.843
ENSNMLP00000032283
DEAD (Asp-Glu-Ala-Asp) box polypeptide 18.
    
  0.824
ENSNMLP00000003322
Ribosomal L1 domain containing 1.
    
 0.795
ENSNMLP00000002157
DEAD (Asp-Glu-Ala-Asp) box polypeptide 10.
    
 0.792
ENSNMLP00000035842
KRR1 small subunit processome component homolog.
  
 
  0.773
ENSNMLP00000012848
NOP14 nucleolar protein homolog (yeast).
    
  0.771
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.