STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000041316Pseudouridine synthase like 1. (306 aa)    
Predicted Functional Partners:
ENSNMLP00000019745
Mitochondrial ribosomal protein L17.
  
  
 0.888
ENSNMLP00000043984
TruB pseudouridine (psi) synthase family member 2.
  
 0.879
ENSNMLP00000015078
RNA polymerase I and III subunit C.
  
  
 0.861
ENSNMLP00000033523
Polymerase (RNA) II (DNA directed) polypeptide C.
  
  
 0.861
ENSNMLP00000001475
Methyltransferase like 15.
   
 
 0.841
ENSNMLP00000020117
WD repeat domain 4.
   
 
 0.833
ENSNMLP00000021678
TruB pseudouridine (psi) synthase family member 1.
  
 0.832
ENSNMLP00000018436
RNA pseudouridine synthase domain containing 1.
  
  
 0.831
ENSNMLP00000006368
Guanine monophosphate synthase.
  
 
  0.829
ENSNMLP00000007424
Dyskeratosis congenita 1, dyskerin.
  
 0.819
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.