ENSNMLP00000041360 protein (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSNMLP00000041360

annotation not available (134 aa)

Predicted Functional Partners:

ENSNMLP00000040448

0.988

ENSNMLP00000029923

0.987

ENSNMLP00000010042

0.985

ENSNMLP00000036107

0.985

ENSNMLP00000044609

0.980

ENSNMLP00000036520

0.975

ENSNMLP00000021311

0.974

ENSNMLP00000024711

0.974

ENSNMLP00000021444

0.956

ENSNMLP00000039225

0.942

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSNMLP00000010042	ENSNMLP00000021444	annotation not available	Dpy-30 histone methyltransferase complex regulatory subunit.	0.982
ENSNMLP00000010042	ENSNMLP00000024711	annotation not available	annotation not available	0.963
ENSNMLP00000010042	ENSNMLP00000029923	annotation not available	Ash2 like, histone lysine methyltransferase complex subunit.	0.996
ENSNMLP00000010042	ENSNMLP00000036107	annotation not available	Lysine (K)-specific demethylase 6B, b.	0.842
ENSNMLP00000010042	ENSNMLP00000036520	annotation not available	PAXIP1 associated glutamate-rich protein 1.	0.980
ENSNMLP00000010042	ENSNMLP00000039225	annotation not available	annotation not available	0.463
ENSNMLP00000010042	ENSNMLP00000040448	annotation not available	annotation not available	0.850
ENSNMLP00000010042	ENSNMLP00000041360	annotation not available	annotation not available	0.985
ENSNMLP00000010042	ENSNMLP00000044609	annotation not available	Retinoblastoma binding protein 5.	0.996
ENSNMLP00000021311	ENSNMLP00000029923	Tumor protein p53 binding protein, 1.	Ash2 like, histone lysine methyltransferase complex subunit.	0.527
ENSNMLP00000021311	ENSNMLP00000039225	Tumor protein p53 binding protein, 1.	annotation not available	0.968
ENSNMLP00000021311	ENSNMLP00000041360	Tumor protein p53 binding protein, 1.	annotation not available	0.974
ENSNMLP00000021444	ENSNMLP00000010042	Dpy-30 histone methyltransferase complex regulatory subunit.	annotation not available	0.982
ENSNMLP00000021444	ENSNMLP00000024711	Dpy-30 histone methyltransferase complex regulatory subunit.	annotation not available	0.955
ENSNMLP00000021444	ENSNMLP00000029923	Dpy-30 histone methyltransferase complex regulatory subunit.	Ash2 like, histone lysine methyltransferase complex subunit.	0.998
ENSNMLP00000021444	ENSNMLP00000036107	Dpy-30 histone methyltransferase complex regulatory subunit.	Lysine (K)-specific demethylase 6B, b.	0.982
ENSNMLP00000021444	ENSNMLP00000036520	Dpy-30 histone methyltransferase complex regulatory subunit.	PAXIP1 associated glutamate-rich protein 1.	0.948
ENSNMLP00000021444	ENSNMLP00000040448	Dpy-30 histone methyltransferase complex regulatory subunit.	annotation not available	0.987
ENSNMLP00000021444	ENSNMLP00000041360	Dpy-30 histone methyltransferase complex regulatory subunit.	annotation not available	0.956
ENSNMLP00000021444	ENSNMLP00000044609	Dpy-30 histone methyltransferase complex regulatory subunit.	Retinoblastoma binding protein 5.	0.998