STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000041443General transcription factor IIA, 1-like. (452 aa)    
Predicted Functional Partners:
ENSNMLP00000017292
General transcription factor IIA, 2.
    
 0.993
ENSNMLP00000027278
General transcription factor IIB.
   
 0.990
ENSNMLP00000032523
TBP-like 1.
   
 0.990
ENSNMLP00000043771
General transcription factor IIE, polypeptide 1, alpha.
    
 0.988
ENSNMLP00000032391
General transcription factor IIH, polypeptide 4.
    
 0.984
ENSNMLP00000011580
TATA box binding protein like 2.
   
 0.983
ENSNMLP00000042510
TATA box binding protein.
   
 0.983
ENSNMLP00000031971
General transcription factor IIE, polypeptide 2, beta.
    
 0.981
ENSNMLP00000016276
General transcription factor IIF, polypeptide 1.
    
 0.978
ENSNMLP00000026015
Excision repair cross-complementation group 2.
    
  0.977
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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