STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000041529Limb development membrane protein 1. (493 aa)    
Predicted Functional Partners:
ENSNMLP00000041553
Sonic hedgehog signaling molecule a.
 
   
 0.612
ENSNMLP00000003161
annotation not available
 
   
 0.583
ENSNMLP00000024411
Low density lipoprotein receptor-related protein 4.
    
  0.527
ENSNMLP00000031526
annotation not available
    
  0.527
ENSNMLP00000044368
annotation not available
    
  0.527
ENSNMLP00000014291
Desert hedgehog signaling molecule.
 
   
 0.495
ENSNMLP00000035374
annotation not available
     
 0.495
ENSNMLP00000040268
Wingless-type MMTV integration site family, member 8b.
      
 0.483
ENSNMLP00000017936
S-phase kinase-associated protein 2, E3 ubiquitin protein ligase.
      
 0.471
ENSNMLP00000014825
Family with sequence similarity 210 member B.
      
 0.443
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.